Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SEMA3CQ99985 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SEMA3CQ99985 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SEMA3CQ99985 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SEMA3CQ99985 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEMA3CQ99985 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.77■□□□□ 0.27
SEMA3CQ99985 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SEMA3CQ99985 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SEMA3CQ99985 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 LINC01144-201ENST00000626198 1710 ntBASIC16.76■□□□□ 0.27
SEMA3CQ99985 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 AL355306.1-201ENST00000415580 579 ntBASIC16.76■□□□□ 0.27
SEMA3CQ99985 RPS8P6-201ENST00000426177 609 ntBASIC16.76■□□□□ 0.27
SEMA3CQ99985 AL671277.1-201ENST00000429656 993 ntBASIC16.76■□□□□ 0.27
SEMA3CQ99985 MKNK2P1-201ENST00000437526 628 ntBASIC16.76■□□□□ 0.27
SEMA3CQ99985 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 RARRES2P8-201ENST00000566335 367 ntBASIC16.76■□□□□ 0.27
SEMA3CQ99985 AC005829.1-201ENST00000570002 483 ntBASIC16.76■□□□□ 0.27
SEMA3CQ99985 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 MIR3197-201ENST00000582241 73 ntBASIC16.76■□□□□ 0.27
SEMA3CQ99985 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SEMA3CQ99985 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SEMA3CQ99985 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 AC092364.2-201ENST00000596710 2692 ntBASIC16.75■□□□□ 0.27
SEMA3CQ99985 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEMA3CQ99985 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.75■□□□□ 0.27
SEMA3CQ99985 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEMA3CQ99985 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEMA3CQ99985 PCDHB19P-201ENST00000570871 2371 ntBASIC16.74■□□□□ 0.27
SEMA3CQ99985 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEMA3CQ99985 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.74■□□□□ 0.27
SEMA3CQ99985 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEMA3CQ99985 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SEMA3CQ99985 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.74■□□□□ 0.27
SEMA3CQ99985 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEMA3CQ99985 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms