Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC069224.1-201ENST00000566372 1715 ntBASIC15.63■□□□□ 0.09
NR1H4Q96RI1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.63■□□□□ 0.09
NR1H4Q96RI1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC012618.2-201ENST00000428058 849 ntBASIC15.63■□□□□ 0.09
NR1H4Q96RI1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC233702.5-201ENST00000584107 538 ntBASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC005912.2-201ENST00000619492 2400 ntBASIC15.63■□□□□ 0.09
NR1H4Q96RI1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.63■□□□□ 0.09
NR1H4Q96RI1 AC005252.3-201ENST00000623855 2258 ntBASIC15.63■□□□□ 0.09
NR1H4Q96RI1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 LINC00552-201ENST00000625151 2579 ntBASIC15.62■□□□□ 0.09
NR1H4Q96RI1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H4Q96RI1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 AC005840.4-201ENST00000541242 2494 ntBASIC15.61■□□□□ 0.09
NR1H4Q96RI1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms