Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITCHQ96J02 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITCHQ96J02 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ITCHQ96J02 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ITCHQ96J02 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 AC063926.3-201ENST00000624734 5658 ntBASIC15.81■□□□□ 0.12
ITCHQ96J02 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.81■□□□□ 0.12
ITCHQ96J02 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 PTCHD3P3-201ENST00000403073 906 ntBASIC15.81■□□□□ 0.12
ITCHQ96J02 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.81■□□□□ 0.12
ITCHQ96J02 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.81■□□□□ 0.12
ITCHQ96J02 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.81■□□□□ 0.12
ITCHQ96J02 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.81■□□□□ 0.12
ITCHQ96J02 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.81■□□□□ 0.12
ITCHQ96J02 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.81■□□□□ 0.12
ITCHQ96J02 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.81■□□□□ 0.12
ITCHQ96J02 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.81■□□□□ 0.12
ITCHQ96J02 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 AL513477.1-201ENST00000602865 2407 ntBASIC15.81■□□□□ 0.12
ITCHQ96J02 PCGF3-213ENST00000620529 1899 ntBASIC15.81■□□□□ 0.12
ITCHQ96J02 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.81■□□□□ 0.12
ITCHQ96J02 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITCHQ96J02 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.8■□□□□ 0.12
ITCHQ96J02 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.8■□□□□ 0.12
ITCHQ96J02 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 AL603832.2-201ENST00000566195 2125 ntBASIC15.8■□□□□ 0.12
ITCHQ96J02 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.8■□□□□ 0.12
ITCHQ96J02 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.8■□□□□ 0.12
ITCHQ96J02 GPAA1P2-202ENST00000606848 1787 ntBASIC15.8■□□□□ 0.12
ITCHQ96J02 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.8■□□□□ 0.12
ITCHQ96J02 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.8■□□□□ 0.12
ITCHQ96J02 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.8■□□□□ 0.12
ITCHQ96J02 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 AC023824.1-201ENST00000562945 2975 ntBASIC15.8■□□□□ 0.12
ITCHQ96J02 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.8■□□□□ 0.12
ITCHQ96J02 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.8■□□□□ 0.12
ITCHQ96J02 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ITCHQ96J02 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.8■□□□□ 0.12
ITCHQ96J02 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.8■□□□□ 0.12
ITCHQ96J02 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.8■□□□□ 0.12
ITCHQ96J02 MTDHP4-201ENST00000600287 670 ntBASIC15.8■□□□□ 0.12
ITCHQ96J02 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.8■□□□□ 0.12
ITCHQ96J02 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.8■□□□□ 0.12
ITCHQ96J02 AL355877.3-201ENST00000622820 899 ntBASIC15.8■□□□□ 0.12
ITCHQ96J02 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.8■□□□□ 0.12
ITCHQ96J02 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITCHQ96J02 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ITCHQ96J02 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ITCHQ96J02 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 AC144831.1-201ENST00000573312 2656 ntBASIC15.79■□□□□ 0.12
ITCHQ96J02 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.79■□□□□ 0.12
ITCHQ96J02 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 CYP2A7P1-201ENST00000595391 815 ntBASIC15.79■□□□□ 0.12
ITCHQ96J02 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 AC093458.2-201ENST00000623150 629 ntBASIC15.79■□□□□ 0.12
ITCHQ96J02 AP001350.2-201ENST00000625104 1094 ntBASIC15.79■□□□□ 0.12
ITCHQ96J02 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.79■□□□□ 0.12
ITCHQ96J02 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ITCHQ96J02 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms