Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 HLA-H-201ENST00000383620 1096 ntBASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 RARRES2P9-201ENST00000565168 469 ntBASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 AC093028.1-201ENST00000622998 982 ntBASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ECHDC3Q96DC8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 AC069262.1-201ENST00000539058 672 ntBASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 AC025678.2-201ENST00000562061 970 ntBASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ECHDC3Q96DC8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 AC004449.1-201ENST00000564240 433 ntBASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ECHDC3Q96DC8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.46■□□□□ 0.22
ECHDC3Q96DC8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.46■□□□□ 0.22
ECHDC3Q96DC8 U82695.1-201ENST00000635752 1889 ntBASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms