Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 LINC01115-203ENST00000606068 577 ntBASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 AL512652.2-201ENST00000625156 1716 ntBASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM43Q96BQ3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
TRIM43Q96BQ3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.71■□□□□ 0.42
TRIM43Q96BQ3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 AL138688.1-201ENST00000624851 1594 ntBASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 AL136982.4-201ENST00000437689 1740 ntBASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 AP001889.1-201ENST00000525414 633 ntBASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 AP000812.2-201ENST00000538934 718 ntBASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 RHOQP1-201ENST00000555758 579 ntBASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 AL359711.2-201ENST00000563105 872 ntBASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 AL158212.4-201ENST00000624062 1286 ntBASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM43Q96BQ3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 C2orf69P2-201ENST00000562032 1123 ntBASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 Z97205.2-201ENST00000564697 1639 ntBASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM43Q96BQ3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM43Q96BQ3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms