Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SH3KBP1Q96B97 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 AL118508.1-201ENST00000613502 2345 ntBASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 PMS2P2-201ENST00000425039 1128 ntBASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 AC004835.2-201ENST00000603762 682 ntBASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 AL161645.1-201ENST00000622716 1255 ntBASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 KRT8P49-201ENST00000604166 1432 ntBASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH3KBP1Q96B97 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 PCDHA14-201ENST00000506751 2298 ntBASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 KRT18P28-201ENST00000453838 1332 ntBASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3KBP1Q96B97 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SH3KBP1Q96B97 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SH3KBP1Q96B97 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms