Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.3■□□□□ 0.2
CLDN23Q96B33 AC036164.1-201ENST00000570544 333 ntBASIC16.3■□□□□ 0.2
CLDN23Q96B33 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 AC244093.1-201ENST00000610837 814 ntBASIC16.3■□□□□ 0.2
CLDN23Q96B33 CU634019.7-201ENST00000624153 1185 ntBASIC16.3■□□□□ 0.2
CLDN23Q96B33 FP236241.2-201ENST00000624906 1185 ntBASIC16.3■□□□□ 0.2
CLDN23Q96B33 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 PCDHB17P-201ENST00000539533 2393 ntBASIC16.29■□□□□ 0.2
CLDN23Q96B33 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 AC004945.1-201ENST00000416738 983 ntBASIC16.29■□□□□ 0.2
CLDN23Q96B33 FAM21FP-201ENST00000426241 1131 ntBASIC16.29■□□□□ 0.2
CLDN23Q96B33 RPL7P3-201ENST00000441388 714 ntBASIC16.29■□□□□ 0.2
CLDN23Q96B33 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN23Q96B33 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN23Q96B33 CYP4F24P-201ENST00000586049 1580 ntBASIC16.29■□□□□ 0.2
CLDN23Q96B33 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AC008764.6-201ENST00000595909 2069 ntBASIC16.28■□□□□ 0.2
CLDN23Q96B33 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AC005229.1-201ENST00000392885 409 ntBASIC16.28■□□□□ 0.2
CLDN23Q96B33 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AP002490.2-201ENST00000524791 560 ntBASIC16.28■□□□□ 0.2
CLDN23Q96B33 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN23Q96B33 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 AL391256.1-201ENST00000443260 1855 ntBASIC16.28■□□□□ 0.2
CLDN23Q96B33 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN23Q96B33 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms