Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 AL353732.1-201ENST00000569618 1459 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 LINC02012-201ENST00000608206 1725 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 PCDHA14-201ENST00000506751 2298 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 HMGA1P7-201ENST00000406908 502 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 AL592309.1-201ENST00000443127 649 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 FAM86GP-201ENST00000448322 971 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 AL135744.1-201ENST00000565098 629 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 AC092364.2-202ENST00000597012 1073 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 AC093512.1-201ENST00000617969 520 ntBASIC17.44■□□□□ 0.38
ATP2A3Q93084 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A3Q93084 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 HCG4-201ENST00000418983 998 ntBASIC17.43■□□□□ 0.38
ATP2A3Q93084 FAM8A3P-201ENST00000427218 844 ntBASIC17.43■□□□□ 0.38
ATP2A3Q93084 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 AC079140.1-201ENST00000508039 487 ntBASIC17.43■□□□□ 0.38
ATP2A3Q93084 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 AC093520.2-201ENST00000561830 333 ntBASIC17.43■□□□□ 0.38
ATP2A3Q93084 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A3Q93084 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A3Q93084 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 EGFEM1P-202ENST00000431685 1563 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms