Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 SPDYE11-202ENST00000450699 704 ntBASIC18.69■□□□□ 0.58
TNFRSF25Q93038 CEND1P1-201ENST00000451006 455 ntBASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AP000842.3-202ENST00000569238 1080 ntBASIC18.69■□□□□ 0.58
TNFRSF25Q93038 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 SPDYE9P-201ENST00000570642 692 ntBASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 SPDYE10P-202ENST00000612005 668 ntBASIC18.69■□□□□ 0.58
TNFRSF25Q93038 SPDYE8P-202ENST00000612377 668 ntBASIC18.69■□□□□ 0.58
TNFRSF25Q93038 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF25Q93038 AC024909.3-201ENST00000611513 2257 ntBASIC18.69■□□□□ 0.58
TNFRSF25Q93038 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 TIMM8BP1-201ENST00000452384 211 ntBASIC18.68■□□□□ 0.58
TNFRSF25Q93038 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 AC093520.2-201ENST00000561830 333 ntBASIC18.68■□□□□ 0.58
TNFRSF25Q93038 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF25Q93038 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF25Q93038 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms