Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.19□□□□□ -0.14
USP9XQ93008 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
USP9XQ93008 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
USP9XQ93008 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
USP9XQ93008 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.19□□□□□ -0.14
USP9XQ93008 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.19□□□□□ -0.14
USP9XQ93008 BX284668.4-201ENST00000453917 508 ntBASIC14.19□□□□□ -0.14
USP9XQ93008 FTH1P14-201ENST00000482930 551 ntBASIC14.19□□□□□ -0.14
USP9XQ93008 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.19□□□□□ -0.14
USP9XQ93008 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.19□□□□□ -0.14
USP9XQ93008 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
USP9XQ93008 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.19□□□□□ -0.14
USP9XQ93008 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.19□□□□□ -0.14
USP9XQ93008 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USP9XQ93008 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.19□□□□□ -0.14
USP9XQ93008 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.19□□□□□ -0.14
USP9XQ93008 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.19□□□□□ -0.14
USP9XQ93008 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.19□□□□□ -0.14
USP9XQ93008 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.18□□□□□ -0.14
USP9XQ93008 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.18□□□□□ -0.14
USP9XQ93008 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
USP9XQ93008 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.18□□□□□ -0.14
USP9XQ93008 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.18□□□□□ -0.14
USP9XQ93008 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 UPF3AP2-201ENST00000457924 1132 ntBASIC14.18□□□□□ -0.14
USP9XQ93008 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.18□□□□□ -0.14
USP9XQ93008 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.18□□□□□ -0.14
USP9XQ93008 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.18□□□□□ -0.14
USP9XQ93008 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.18□□□□□ -0.14
USP9XQ93008 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.18□□□□□ -0.14
USP9XQ93008 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.18□□□□□ -0.14
USP9XQ93008 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.18□□□□□ -0.14
USP9XQ93008 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.18□□□□□ -0.14
USP9XQ93008 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.18□□□□□ -0.14
USP9XQ93008 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.18□□□□□ -0.14
USP9XQ93008 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.18□□□□□ -0.14
USP9XQ93008 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.18□□□□□ -0.14
USP9XQ93008 RHOXF1P1-202ENST00000635473 501 ntBASIC14.18□□□□□ -0.14
USP9XQ93008 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
USP9XQ93008 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
USP9XQ93008 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 MIR1227-201ENST00000408484 88 ntBASIC14.17□□□□□ -0.14
USP9XQ93008 FTLP1-201ENST00000449155 526 ntBASIC14.17□□□□□ -0.14
USP9XQ93008 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.17□□□□□ -0.14
USP9XQ93008 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.17□□□□□ -0.14
USP9XQ93008 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
USP9XQ93008 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms