Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
USP6NLQ92738 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
USP6NLQ92738 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.59■□□□□ 0.57
USP6NLQ92738 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
USP6NLQ92738 MEP1AP4-201ENST00000423244 1087 ntBASIC18.59■□□□□ 0.57
USP6NLQ92738 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6NLQ92738 TPRX2P-201ENST00000535362 881 ntBASIC18.59■□□□□ 0.57
USP6NLQ92738 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6NLQ92738 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.59■□□□□ 0.57
USP6NLQ92738 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6NLQ92738 AC024267.1-201ENST00000582320 895 ntBASIC18.59■□□□□ 0.57
USP6NLQ92738 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.59■□□□□ 0.57
USP6NLQ92738 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.59■□□□□ 0.57
USP6NLQ92738 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.59■□□□□ 0.57
USP6NLQ92738 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.59■□□□□ 0.57
USP6NLQ92738 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.59■□□□□ 0.57
USP6NLQ92738 HTR7P1-202ENST00000624664 4411 ntBASIC18.59■□□□□ 0.57
USP6NLQ92738 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
USP6NLQ92738 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6NLQ92738 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
USP6NLQ92738 AC092053.1-201ENST00000605787 1936 ntBASIC18.59■□□□□ 0.57
USP6NLQ92738 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.58■□□□□ 0.57
USP6NLQ92738 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.58■□□□□ 0.57
USP6NLQ92738 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
USP6NLQ92738 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.58■□□□□ 0.57
USP6NLQ92738 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.58■□□□□ 0.57
USP6NLQ92738 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP6NLQ92738 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
USP6NLQ92738 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.58■□□□□ 0.56
USP6NLQ92738 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.58■□□□□ 0.56
USP6NLQ92738 TTTY23B-201ENST00000442790 549 ntBASIC18.58■□□□□ 0.56
USP6NLQ92738 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.58■□□□□ 0.56
USP6NLQ92738 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
USP6NLQ92738 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.58■□□□□ 0.56
USP6NLQ92738 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP6NLQ92738 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
USP6NLQ92738 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6NLQ92738 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP6NLQ92738 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.57■□□□□ 0.56
USP6NLQ92738 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP6NLQ92738 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6NLQ92738 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.57■□□□□ 0.56
USP6NLQ92738 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.57■□□□□ 0.56
USP6NLQ92738 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.57■□□□□ 0.56
USP6NLQ92738 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.57■□□□□ 0.56
USP6NLQ92738 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.57■□□□□ 0.56
USP6NLQ92738 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP6NLQ92738 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms