Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AC106881.1-201ENST00000605849 3329 ntBASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 MIR1238-201ENST00000408483 83 ntBASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 ECEL1P3-201ENST00000427961 737 ntBASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MBD3L1Q8WWY6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 FAM8A6P-201ENST00000407496 1135 ntBASIC13□□□□□ -0.33
MBD3L1Q8WWY6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 ZNF444P1-201ENST00000559497 298 ntBASIC13□□□□□ -0.33
MBD3L1Q8WWY6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 AC010654.1-201ENST00000615722 808 ntBASIC13□□□□□ -0.33
MBD3L1Q8WWY6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 AL359258.3-201ENST00000622910 2331 ntBASIC13□□□□□ -0.33
MBD3L1Q8WWY6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L1Q8WWY6 R3HDM2P2-201ENST00000401880 2116 ntBASIC13□□□□□ -0.33
MBD3L1Q8WWY6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L1Q8WWY6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms