Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 AL031731.1-201ENST00000642131 2094 ntBASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD2Q8NHY2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 AC097637.2-201ENST00000624096 1997 ntBASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 AC006058.4-201ENST00000624016 1670 ntBASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD2Q8NHY2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 AC126755.1-201ENST00000525846 6405 ntBASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 TSPY22P-201ENST00000427496 604 ntBASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms