Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 KRT18P16-201ENST00000510337 1294 ntBASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AC008694.1-202ENST00000636953 945 ntBASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 MYCNOS-205ENST00000641950 531 ntBASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AC027601.5-201ENST00000624065 2482 ntBASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 RER1-204ENST00000378518 522 ntTSL 3 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 KRT18P41-201ENST00000518924 1277 ntBASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 AL160286.2-201ENST00000567150 934 ntBASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 AC069236.1-201ENST00000604339 616 ntBASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 GRAMD4P4-201ENST00000613563 1115 ntBASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 AC010536.3-201ENST00000620306 533 ntBASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 AC092437.1-201ENST00000624794 1048 ntBASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC9.07□□□□□ -0.96
SPTSSBQ8NFR3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms