Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC021097.1-201ENST00000607902 574 ntBASIC15.5■□□□□ 0.07
NUP43Q8NFH3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 AC007064.4-201ENST00000637740 555 ntBASIC15.5■□□□□ 0.07
NUP43Q8NFH3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 AL391005.1-201ENST00000623953 2435 ntBASIC15.5■□□□□ 0.07
NUP43Q8NFH3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 MTHFR-217ENST00000641820 1569 ntBASIC15.49■□□□□ 0.07
NUP43Q8NFH3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 IL9RP2-201ENST00000423948 1312 ntBASIC15.49■□□□□ 0.07
NUP43Q8NFH3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.49■□□□□ 0.07
NUP43Q8NFH3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 PMS2P4-201ENST00000412466 1052 ntBASIC15.49■□□□□ 0.07
NUP43Q8NFH3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 FDX1P1-201ENST00000449115 551 ntBASIC15.49■□□□□ 0.07
NUP43Q8NFH3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 AC023141.13-201ENST00000604991 943 ntBASIC15.49■□□□□ 0.07
NUP43Q8NFH3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 AL513523.2-202ENST00000427283 2040 ntBASIC15.49■□□□□ 0.07
NUP43Q8NFH3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NUP43Q8NFH3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 NFIC-211ENST00000641145 8399 ntBASIC15.48■□□□□ 0.07
NUP43Q8NFH3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NUP43Q8NFH3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms