Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC004835.2-201ENST00000603762 682 ntBASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 KRT8P39-201ENST00000396270 1433 ntBASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
PCDH20Q8N6Y1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 FER1L4-210ENST00000615531 5998 ntBASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 AC004461.1-201ENST00000412461 403 ntBASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 KRT8P48-201ENST00000515599 1220 ntBASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDH20Q8N6Y1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms