Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 AL139384.1-201ENST00000612143 3047 ntBASIC17.96■□□□□ 0.47
VPS52Q8N1B4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
VPS52Q8N1B4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
VPS52Q8N1B4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
VPS52Q8N1B4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VPS52Q8N1B4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.96■□□□□ 0.46
VPS52Q8N1B4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 AC236430.1-201ENST00000402231 743 ntBASIC17.95■□□□□ 0.46
VPS52Q8N1B4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 IGHV3-42-201ENST00000520410 361 ntBASIC17.95■□□□□ 0.46
VPS52Q8N1B4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS52Q8N1B4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 AC002472.2-201ENST00000442739 958 ntBASIC17.94■□□□□ 0.46
VPS52Q8N1B4 TSPY16P-201ENST00000449843 468 ntBASIC17.94■□□□□ 0.46
VPS52Q8N1B4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 AC087641.1-201ENST00000557561 1021 ntBASIC17.94■□□□□ 0.46
VPS52Q8N1B4 AC091167.2-201ENST00000579581 588 ntBASIC17.94■□□□□ 0.46
VPS52Q8N1B4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 AL390754.1-201ENST00000619088 582 ntBASIC17.94■□□□□ 0.46
VPS52Q8N1B4 AC008267.7-201ENST00000624570 1194 ntBASIC17.94■□□□□ 0.46
VPS52Q8N1B4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS52Q8N1B4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS52Q8N1B4 UGT1A2P-201ENST00000454886 866 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms