Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRIM42Q8IWZ5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 POU5F1P6-201ENST00000466990 990 ntBASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 AC011498.5-201ENST00000592027 486 ntBASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 AP005117.1-202ENST00000581724 1908 ntBASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM42Q8IWZ5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 PMPCAP1-201ENST00000508114 1576 ntBASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 AC069148.1-201ENST00000608741 768 ntBASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 AC093458.2-201ENST00000623150 629 ntBASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM42Q8IWZ5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 AC010491.1-201ENST00000563101 2797 ntBASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 TERC-201ENST00000602385 541 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms