Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 AC006538.1-201ENST00000567905 1585 ntBASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 UBALD1-205ENST00000590891 2641 ntBASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 SPDYE7P-202ENST00000420373 878 ntBASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 AC073389.1-201ENST00000595595 795 ntBASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN4BQ8IWT1 GPAA1P2-202ENST00000606848 1787 ntBASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 AC125807.1-201ENST00000483097 614 ntBASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 AC020765.3-201ENST00000613051 740 ntBASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 AC078925.2-201ENST00000624013 1973 ntBASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN4BQ8IWT1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SCN4BQ8IWT1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCN4BQ8IWT1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SCN4BQ8IWT1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCN4BQ8IWT1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCN4BQ8IWT1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SCN4BQ8IWT1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms