Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 MRPL20P1-201ENST00000400819 433 ntBASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 AC005412.3-201ENST00000580309 715 ntBASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 AL049840.3-201ENST00000602669 611 ntBASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 AC117500.6-201ENST00000624871 588 ntBASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 AP001350.2-201ENST00000625104 1094 ntBASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 FAM215A-202ENST00000632077 792 ntBASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 PGM5P2-202ENST00000637225 1043 ntBASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00346Q8IVM7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 FLJ16779-201ENST00000612722 7638 ntBASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 AL450487.1-201ENST00000426799 995 ntBASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 OR7E47P-204ENST00000575924 449 ntBASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms