Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.65■□□□□ 0.9
SKAP1Q86WV1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 KRT18P31-201ENST00000506277 1292 ntBASIC20.65■□□□□ 0.9
SKAP1Q86WV1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 AF238378.1-201ENST00000526806 358 ntBASIC20.65■□□□□ 0.9
SKAP1Q86WV1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 AC010654.1-201ENST00000615722 808 ntBASIC20.65■□□□□ 0.9
SKAP1Q86WV1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.65■□□□□ 0.9
SKAP1Q86WV1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SKAP1Q86WV1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.64■□□□□ 0.9
SKAP1Q86WV1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SKAP1Q86WV1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 DUSP5P1-201ENST00000441325 1139 ntBASIC20.64■□□□□ 0.89
SKAP1Q86WV1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.64■□□□□ 0.89
SKAP1Q86WV1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SKAP1Q86WV1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 AC136621.1-201ENST00000624017 2304 ntBASIC20.63■□□□□ 0.89
SKAP1Q86WV1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 ARMC10P1-201ENST00000313754 855 ntBASIC20.63■□□□□ 0.89
SKAP1Q86WV1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 AC139887.3-201ENST00000568585 713 ntBASIC20.63■□□□□ 0.89
SKAP1Q86WV1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 AC069224.1-201ENST00000566372 1715 ntBASIC20.63■□□□□ 0.89
SKAP1Q86WV1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SKAP1Q86WV1 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.62■□□□□ 0.89
SKAP1Q86WV1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SKAP1Q86WV1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms