Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 AC092384.3-202ENST00000564646 2873 ntBASIC17.15■□□□□ 0.34
CCDC25Q86WR0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 AC023824.1-201ENST00000562945 2975 ntBASIC17.15■□□□□ 0.34
CCDC25Q86WR0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 TERC-201ENST00000602385 541 ntBASIC17.15■□□□□ 0.34
CCDC25Q86WR0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC25Q86WR0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC25Q86WR0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.14■□□□□ 0.34
CCDC25Q86WR0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC25Q86WR0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 AL590787.1-201ENST00000568856 1315 ntBASIC17.14■□□□□ 0.33
CCDC25Q86WR0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 AC007326.2-201ENST00000624224 7579 ntBASIC17.14■□□□□ 0.33
CCDC25Q86WR0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC25Q86WR0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms