Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ALYREFQ86V81 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ALYREFQ86V81 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALYREFQ86V81 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ALYREFQ86V81 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALYREFQ86V81 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALYREFQ86V81 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALYREFQ86V81 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ALYREFQ86V81 AC005915.1-201ENST00000624912 2018 ntBASIC17.37■□□□□ 0.37
ALYREFQ86V81 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 AC241585.1-201ENST00000433527 519 ntBASIC17.36■□□□□ 0.37
ALYREFQ86V81 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.36■□□□□ 0.37
ALYREFQ86V81 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 MIR4259-201ENST00000584466 101 ntBASIC17.36■□□□□ 0.37
ALYREFQ86V81 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.36■□□□□ 0.37
ALYREFQ86V81 LINC01451-201ENST00000623792 534 ntBASIC17.36■□□□□ 0.37
ALYREFQ86V81 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALYREFQ86V81 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.36■□□□□ 0.37
ALYREFQ86V81 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 GPS2P2-201ENST00000430745 888 ntBASIC17.35■□□□□ 0.37
ALYREFQ86V81 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 OR7E47P-204ENST00000575924 449 ntBASIC17.35■□□□□ 0.37
ALYREFQ86V81 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALYREFQ86V81 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.35■□□□□ 0.37
ALYREFQ86V81 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALYREFQ86V81 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
ALYREFQ86V81 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALYREFQ86V81 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALYREFQ86V81 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALYREFQ86V81 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALYREFQ86V81 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALYREFQ86V81 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.34■□□□□ 0.37
ALYREFQ86V81 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ALYREFQ86V81 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALYREFQ86V81 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALYREFQ86V81 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
ALYREFQ86V81 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ALYREFQ86V81 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.34■□□□□ 0.37
ALYREFQ86V81 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms