Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AC018735.1-201ENST00000437208 1502 ntBASIC13.69□□□□□ -0.22
CSMD2Q7Z408 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 BX284668.4-201ENST00000453917 508 ntBASIC13.69□□□□□ -0.22
CSMD2Q7Z408 RN7SL399P-201ENST00000471648 279 ntBASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CSMD2Q7Z408 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 AC104306.2-201ENST00000451877 341 ntBASIC13.68□□□□□ -0.22
CSMD2Q7Z408 UPF3AP2-201ENST00000457924 1132 ntBASIC13.68□□□□□ -0.22
CSMD2Q7Z408 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 KRT90P-201ENST00000549264 1064 ntBASIC13.68□□□□□ -0.22
CSMD2Q7Z408 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 KRT8P49-201ENST00000604166 1432 ntBASIC13.68□□□□□ -0.22
CSMD2Q7Z408 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 AC133539.2-201ENST00000604757 467 ntBASIC13.68□□□□□ -0.22
CSMD2Q7Z408 AL645728.1-201ENST00000366221 2101 ntBASIC13.68□□□□□ -0.22
CSMD2Q7Z408 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSMD2Q7Z408 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 RN7SL555P-201ENST00000584742 339 ntBASIC13.67□□□□□ -0.22
CSMD2Q7Z408 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms