Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.55□□□□□ -0.24
VPS13CQ709C8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 AC009053.2-201ENST00000563701 2365 ntBASIC13.55□□□□□ -0.24
VPS13CQ709C8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.55□□□□□ -0.24
VPS13CQ709C8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.55□□□□□ -0.24
VPS13CQ709C8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13CQ709C8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS13CQ709C8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AL021920.2-201ENST00000624828 1351 ntBASIC13.54□□□□□ -0.24
VPS13CQ709C8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 KLF2P4-201ENST00000451959 1225 ntBASIC13.54□□□□□ -0.24
VPS13CQ709C8 IGHJ2P-201ENST00000454480 60 ntBASIC13.54□□□□□ -0.24
VPS13CQ709C8 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AP000812.2-201ENST00000538934 718 ntBASIC13.54□□□□□ -0.24
VPS13CQ709C8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AC018892.3-201ENST00000623986 2499 ntBASIC13.54□□□□□ -0.24
VPS13CQ709C8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 KRT18P34-201ENST00000488218 1270 ntBASIC13.54□□□□□ -0.24
VPS13CQ709C8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 MIR3615-201ENST00000581999 87 ntBASIC13.54□□□□□ -0.24
VPS13CQ709C8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS13CQ709C8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13CQ709C8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 SDHAP3-202ENST00000515467 728 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 AC009542.2-202ENST00000619004 1067 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 FTH1P14-201ENST00000482930 551 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 AL022328.1-201ENST00000610050 478 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms