Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 AC022532.1-201ENST00000624563 1728 ntBASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 AC125634.1-201ENST00000438758 1403 ntBASIC15.94■□□□□ 0.14
PPP4R4Q6NUP7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 RCN1P2-201ENST00000398357 915 ntBASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 TSPY19P-201ENST00000418461 509 ntBASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 POM121L3P-201ENST00000419331 1163 ntBASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 TSPY18P-201ENST00000441642 509 ntBASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 KRT16P4-201ENST00000453883 522 ntBASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 RN7SL510P-201ENST00000581311 263 ntBASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 AC114341.1-201ENST00000618070 349 ntBASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PPP4R4Q6NUP7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 AL603832.2-201ENST00000566195 2125 ntBASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 COX5BP2-201ENST00000392354 334 ntBASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 UNC93B7-201ENST00000509439 705 ntBASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 AL138831.2-201ENST00000606564 490 ntBASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PPP4R4Q6NUP7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms