Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 CICP23-201ENST00000605013 2741 ntBASIC15.64■□□□□ 0.09
LPCAT4Q643R3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
LPCAT4Q643R3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 AL512652.2-201ENST00000625156 1716 ntBASIC15.63■□□□□ 0.09
LPCAT4Q643R3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.63■□□□□ 0.09
LPCAT4Q643R3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 AC128688.1-201ENST00000487626 519 ntBASIC15.63■□□□□ 0.09
LPCAT4Q643R3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 AP000525.1-201ENST00000608286 694 ntBASIC15.63■□□□□ 0.09
LPCAT4Q643R3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 LINC00528-201ENST00000600723 2160 ntBASIC15.63■□□□□ 0.09
LPCAT4Q643R3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 AL031731.1-201ENST00000642131 2094 ntBASIC15.63■□□□□ 0.09
LPCAT4Q643R3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LPCAT4Q643R3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 SNX33P1-201ENST00000592116 1762 ntBASIC15.62■□□□□ 0.09
LPCAT4Q643R3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 AC007191.1-201ENST00000623179 2995 ntBASIC15.62■□□□□ 0.09
LPCAT4Q643R3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 AC103564.2-201ENST00000432853 1299 ntBASIC15.62■□□□□ 0.09
LPCAT4Q643R3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LPCAT4Q643R3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms