Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 ZNF259P1-201ENST00000407656 1365 ntBASIC19.76■□□□□ 0.75
RNF20Q5VTR2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 AC026691.1-201ENST00000602502 2017 ntBASIC19.75■□□□□ 0.75
RNF20Q5VTR2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 AC109635.5-201ENST00000533593 962 ntBASIC19.75■□□□□ 0.75
RNF20Q5VTR2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 BX640515.1-201ENST00000617215 977 ntBASIC19.75■□□□□ 0.75
RNF20Q5VTR2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF20Q5VTR2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 AL391005.1-201ENST00000623953 2435 ntBASIC19.74■□□□□ 0.75
RNF20Q5VTR2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms