Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 GGT4P-201ENST00000623672 1708 ntBASIC20.99■□□□□ 0.95
NUP188Q5SRE5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUP188Q5SRE5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 YBX1P6-201ENST00000442962 1002 ntBASIC20.98■□□□□ 0.95
NUP188Q5SRE5 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 LDHBP1-201ENST00000455730 1119 ntBASIC20.98■□□□□ 0.95
NUP188Q5SRE5 AP000812.2-201ENST00000538934 718 ntBASIC20.98■□□□□ 0.95
NUP188Q5SRE5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 AL442647.2-201ENST00000429864 857 ntBASIC20.98■□□□□ 0.95
NUP188Q5SRE5 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 TDH-203ENST00000531764 1110 ntBASIC20.98■□□□□ 0.95
NUP188Q5SRE5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.98■□□□□ 0.95
NUP188Q5SRE5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.97■□□□□ 0.95
NUP188Q5SRE5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NUP188Q5SRE5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 AC253536.4-201ENST00000440539 267 ntBASIC20.96■□□□□ 0.95
NUP188Q5SRE5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 AC025048.3-201ENST00000590609 569 ntBASIC20.96■□□□□ 0.95
NUP188Q5SRE5 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.96■□□□□ 0.95
NUP188Q5SRE5 AC005702.4-201ENST00000618393 416 ntBASIC20.96■□□□□ 0.95
NUP188Q5SRE5 AL158212.4-201ENST00000624062 1286 ntBASIC20.96■□□□□ 0.95
NUP188Q5SRE5 CU634019.7-201ENST00000624153 1185 ntBASIC20.96■□□□□ 0.95
NUP188Q5SRE5 FP236241.2-201ENST00000624906 1185 ntBASIC20.96■□□□□ 0.95
NUP188Q5SRE5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NUP188Q5SRE5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms