Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 AC080080.1-201ENST00000625121 2420 ntBASIC19.65■□□□□ 0.74
PDS5AQ29RF7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDS5AQ29RF7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDS5AQ29RF7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDS5AQ29RF7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDS5AQ29RF7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDS5AQ29RF7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
PDS5AQ29RF7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.64■□□□□ 0.73
PDS5AQ29RF7 RN7SL618P-201ENST00000477850 296 ntBASIC19.64■□□□□ 0.73
PDS5AQ29RF7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.64■□□□□ 0.73
PDS5AQ29RF7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDS5AQ29RF7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 BCL2-203ENST00000589955 5011 ntBASIC19.63■□□□□ 0.73
PDS5AQ29RF7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.63■□□□□ 0.73
PDS5AQ29RF7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 EEF1DP4-201ENST00000446006 880 ntBASIC19.63■□□□□ 0.73
PDS5AQ29RF7 CRB3P1-201ENST00000449338 276 ntBASIC19.63■□□□□ 0.73
PDS5AQ29RF7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 AC004840.1-201ENST00000636359 365 ntBASIC19.63■□□□□ 0.73
PDS5AQ29RF7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDS5AQ29RF7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDS5AQ29RF7 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms