Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CDH17Q12864 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.73■□□□□ 0.27
CDH17Q12864 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH17Q12864 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDH17Q12864 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH17Q12864 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH17Q12864 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH17Q12864 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDH17Q12864 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
CDH17Q12864 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH17Q12864 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH17Q12864 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH17Q12864 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH17Q12864 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH17Q12864 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH17Q12864 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH17Q12864 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH17Q12864 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH17Q12864 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH17Q12864 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.72■□□□□ 0.27
CDH17Q12864 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDH17Q12864 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH17Q12864 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH17Q12864 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH17Q12864 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH17Q12864 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH17Q12864 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDH17Q12864 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH17Q12864 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH17Q12864 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH17Q12864 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH17Q12864 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDH17Q12864 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH17Q12864 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH17Q12864 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH17Q12864 AC145285.3-201ENST00000564603 959 ntBASIC16.71■□□□□ 0.27
CDH17Q12864 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.71■□□□□ 0.27
CDH17Q12864 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.71■□□□□ 0.27
CDH17Q12864 AC007064.4-201ENST00000637740 555 ntBASIC16.71■□□□□ 0.27
CDH17Q12864 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CDH17Q12864 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH17Q12864 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH17Q12864 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH17Q12864 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH17Q12864 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDH17Q12864 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDH17Q12864 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDH17Q12864 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CDH17Q12864 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH17Q12864 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH17Q12864 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDH17Q12864 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH17Q12864 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CDH17Q12864 REXO1L8P-201ENST00000604378 1897 ntBASIC16.7■□□□□ 0.26
CDH17Q12864 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH17Q12864 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH17Q12864 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH17Q12864 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH17Q12864 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms