Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.27■□□□□ 0.84
DDR1Q08345 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DDR1Q08345 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
DDR1Q08345 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.27■□□□□ 0.84
DDR1Q08345 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DDR1Q08345 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.27■□□□□ 0.84
DDR1Q08345 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.27■□□□□ 0.84
DDR1Q08345 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.27■□□□□ 0.84
DDR1Q08345 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.27■□□□□ 0.84
DDR1Q08345 AL355994.2-201ENST00000447882 704 ntBASIC20.27■□□□□ 0.84
DDR1Q08345 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.27■□□□□ 0.84
DDR1Q08345 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
DDR1Q08345 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.27■□□□□ 0.84
DDR1Q08345 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.27■□□□□ 0.84
DDR1Q08345 AL158212.4-201ENST00000624062 1286 ntBASIC20.27■□□□□ 0.84
DDR1Q08345 AC068587.10-201ENST00000641210 219 ntBASIC20.27■□□□□ 0.84
DDR1Q08345 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDR1Q08345 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.27■□□□□ 0.84
DDR1Q08345 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.27■□□□□ 0.84
DDR1Q08345 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.27■□□□□ 0.84
DDR1Q08345 GGT4P-201ENST00000623672 1708 ntBASIC20.27■□□□□ 0.83
DDR1Q08345 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.27■□□□□ 0.83
DDR1Q08345 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDR1Q08345 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDR1Q08345 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DDR1Q08345 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.27■□□□□ 0.83
DDR1Q08345 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDR1Q08345 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDR1Q08345 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DDR1Q08345 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
DDR1Q08345 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.26■□□□□ 0.83
DDR1Q08345 AL645728.1-201ENST00000366221 2101 ntBASIC20.26■□□□□ 0.83
DDR1Q08345 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
DDR1Q08345 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.26■□□□□ 0.83
DDR1Q08345 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
DDR1Q08345 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 FO393414.2-201ENST00000405153 598 ntBASIC20.26■□□□□ 0.83
DDR1Q08345 CSF2RBP1-201ENST00000447905 391 ntBASIC20.26■□□□□ 0.83
DDR1Q08345 AC108725.1-201ENST00000495472 409 ntBASIC20.26■□□□□ 0.83
DDR1Q08345 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.26■□□□□ 0.83
DDR1Q08345 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.26■□□□□ 0.83
DDR1Q08345 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DDR1Q08345 AC244093.1-201ENST00000610837 814 ntBASIC20.26■□□□□ 0.83
DDR1Q08345 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.26■□□□□ 0.83
DDR1Q08345 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.26■□□□□ 0.83
DDR1Q08345 AC007613.1-201ENST00000572811 2597 ntBASIC20.26■□□□□ 0.83
DDR1Q08345 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDR1Q08345 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
DDR1Q08345 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.25■□□□□ 0.83
DDR1Q08345 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.25■□□□□ 0.83
DDR1Q08345 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.25■□□□□ 0.83
DDR1Q08345 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.25■□□□□ 0.83
DDR1Q08345 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.25■□□□□ 0.83
DDR1Q08345 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
DDR1Q08345 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DDR1Q08345 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.25■□□□□ 0.83
DDR1Q08345 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.25■□□□□ 0.83
DDR1Q08345 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.25■□□□□ 0.83
DDR1Q08345 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.25■□□□□ 0.83
DDR1Q08345 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.25■□□□□ 0.83
DDR1Q08345 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
DDR1Q08345 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.25■□□□□ 0.83
DDR1Q08345 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDR1Q08345 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
DDR1Q08345 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
DDR1Q08345 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.24■□□□□ 0.83
DDR1Q08345 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.24■□□□□ 0.83
DDR1Q08345 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
DDR1Q08345 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms