Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.66■□□□□ 0.42
CDR2Q01850 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDR2Q01850 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDR2Q01850 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDR2Q01850 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.65■□□□□ 0.42
CDR2Q01850 PCDHA1-201ENST00000378133 2726 ntBASIC17.65■□□□□ 0.42
CDR2Q01850 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.65■□□□□ 0.42
CDR2Q01850 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
CDR2Q01850 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 PMS2P4-201ENST00000412466 1052 ntBASIC17.65■□□□□ 0.42
CDR2Q01850 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.65■□□□□ 0.42
CDR2Q01850 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.65■□□□□ 0.42
CDR2Q01850 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.65■□□□□ 0.42
CDR2Q01850 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 AC021097.1-201ENST00000607902 574 ntBASIC17.65■□□□□ 0.42
CDR2Q01850 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 AL596087.1-201ENST00000400979 1969 ntBASIC17.65■□□□□ 0.42
CDR2Q01850 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CDR2Q01850 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.65■□□□□ 0.42
CDR2Q01850 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDR2Q01850 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDR2Q01850 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDR2Q01850 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.64■□□□□ 0.42
CDR2Q01850 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDR2Q01850 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDR2Q01850 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDR2Q01850 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 AC006449.6-201ENST00000612330 2296 ntBASIC17.64■□□□□ 0.41
CDR2Q01850 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDR2Q01850 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.64■□□□□ 0.41
CDR2Q01850 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.64■□□□□ 0.41
CDR2Q01850 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.64■□□□□ 0.41
CDR2Q01850 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.64■□□□□ 0.41
CDR2Q01850 AC145285.3-201ENST00000564603 959 ntBASIC17.64■□□□□ 0.41
CDR2Q01850 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.64■□□□□ 0.41
CDR2Q01850 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.64■□□□□ 0.41
CDR2Q01850 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.64■□□□□ 0.41
CDR2Q01850 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDR2Q01850 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDR2Q01850 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CDR2Q01850 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDR2Q01850 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms