Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 AC108073.2-201ENST00000464002 357 ntBASIC15.98■□□□□ 0.15
HMGCS1Q01581 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 AL160237.2-201ENST00000556165 472 ntBASIC15.98■□□□□ 0.15
HMGCS1Q01581 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 AC006449.6-201ENST00000612330 2296 ntBASIC15.98■□□□□ 0.15
HMGCS1Q01581 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCS1Q01581 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 AL162727.3-201ENST00000635661 2787 ntBASIC15.98■□□□□ 0.15
HMGCS1Q01581 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGCS1Q01581 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.97■□□□□ 0.15
HMGCS1Q01581 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 REXO1L8P-201ENST00000604378 1897 ntBASIC15.97■□□□□ 0.15
HMGCS1Q01581 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 MRPL20P1-201ENST00000400819 433 ntBASIC15.97■□□□□ 0.15
HMGCS1Q01581 HCG4-201ENST00000418983 998 ntBASIC15.97■□□□□ 0.15
HMGCS1Q01581 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 FAM215A-202ENST00000632077 792 ntBASIC15.97■□□□□ 0.15
HMGCS1Q01581 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 AC022188.1-201ENST00000620960 1664 ntBASIC15.97■□□□□ 0.15
HMGCS1Q01581 AL365203.3-201ENST00000609742 2057 ntBASIC15.97■□□□□ 0.15
HMGCS1Q01581 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCS1Q01581 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCS1Q01581 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 AP002469.2-201ENST00000531724 424 ntBASIC15.96■□□□□ 0.15
HMGCS1Q01581 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms