Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 AC144831.1-201ENST00000573312 2656 ntBASIC16.32■□□□□ 0.2
CDKL1Q00532 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL1Q00532 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 ME2P1-201ENST00000426028 1970 ntBASIC16.31■□□□□ 0.2
CDKL1Q00532 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
CDKL1Q00532 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL1Q00532 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL1Q00532 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 AC108751.1-201ENST00000490852 363 ntBASIC16.31■□□□□ 0.2
CDKL1Q00532 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL1Q00532 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.31■□□□□ 0.2
CDKL1Q00532 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.31■□□□□ 0.2
CDKL1Q00532 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CDKL1Q00532 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.31■□□□□ 0.2
CDKL1Q00532 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.31■□□□□ 0.2
CDKL1Q00532 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 AC116407.3-201ENST00000623905 1129 ntBASIC16.31■□□□□ 0.2
CDKL1Q00532 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDKL1Q00532 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL1Q00532 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL1Q00532 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDKL1Q00532 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDKL1Q00532 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL1Q00532 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 AC092384.3-202ENST00000564646 2873 ntBASIC16.3■□□□□ 0.2
CDKL1Q00532 AC104640.1-201ENST00000562617 2109 ntBASIC16.3■□□□□ 0.2
CDKL1Q00532 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 IGHV3-22-201ENST00000520721 359 ntBASIC16.3■□□□□ 0.2
CDKL1Q00532 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.3■□□□□ 0.2
CDKL1Q00532 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 ACTL9-202ENST00000612068 1252 ntBASIC16.3■□□□□ 0.2
CDKL1Q00532 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDKL1Q00532 AL671710.1-201ENST00000610245 2349 ntBASIC16.3■□□□□ 0.2
CDKL1Q00532 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDKL1Q00532 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL1Q00532 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms