Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H3F3AP84243 AL355306.1-201ENST00000415580 579 ntBASIC14.79□□□□□ -0.04
H3F3AP84243 BX842568.4-201ENST00000421222 227 ntBASIC14.79□□□□□ -0.04
H3F3AP84243 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 HTR5BP-201ENST00000430851 1154 ntBASIC14.79□□□□□ -0.04
H3F3AP84243 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
H3F3AP84243 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.79□□□□□ -0.04
H3F3AP84243 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3AP84243 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.79□□□□□ -0.04
H3F3AP84243 RARRES2P8-201ENST00000566335 367 ntBASIC14.79□□□□□ -0.04
H3F3AP84243 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
H3F3AP84243 AC005829.1-201ENST00000570002 483 ntBASIC14.79□□□□□ -0.04
H3F3AP84243 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.79□□□□□ -0.04
H3F3AP84243 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3AP84243 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.79□□□□□ -0.04
H3F3AP84243 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 AC016027.1-202ENST00000607927 1699 ntBASIC14.79□□□□□ -0.04
H3F3AP84243 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
H3F3AP84243 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
H3F3AP84243 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.79□□□□□ -0.04
H3F3AP84243 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
H3F3AP84243 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
H3F3AP84243 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3AP84243 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3AP84243 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3AP84243 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
H3F3AP84243 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 RPSAP43-201ENST00000402237 625 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 UPF3AP3-201ENST00000420996 769 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 GPX1P2-201ENST00000429271 606 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 AL671277.1-201ENST00000429656 993 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.78□□□□□ -0.04
H3F3AP84243 ALG1L5P-201ENST00000482043 771 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 KRT18P34-201ENST00000488218 1270 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 AC112482.1-201ENST00000492080 688 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 FAM86C2P-203ENST00000528684 1004 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.78□□□□□ -0.04
H3F3AP84243 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
H3F3AP84243 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.78□□□□□ -0.04
H3F3AP84243 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.78□□□□□ -0.04
H3F3AP84243 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
H3F3AP84243 AL118508.1-201ENST00000613502 2345 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H3F3AP84243 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H3F3AP84243 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
H3F3AP84243 ELL2P1-201ENST00000413990 1906 ntBASIC14.78□□□□□ -0.04
H3F3AP84243 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
H3F3AP84243 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
H3F3AP84243 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3AP84243 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3AP84243 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
H3F3AP84243 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.78□□□□□ -0.04
H3F3AP84243 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
H3F3AP84243 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3AP84243 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3AP84243 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3AP84243 AL391005.1-201ENST00000623953 2435 ntBASIC14.77□□□□□ -0.04
H3F3AP84243 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.77□□□□□ -0.04
H3F3AP84243 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
H3F3AP84243 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.77□□□□□ -0.04
H3F3AP84243 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.77□□□□□ -0.04
H3F3AP84243 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3AP84243 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3AP84243 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
H3F3AP84243 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3AP84243 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.77□□□□□ -0.05
H3F3AP84243 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
H3F3AP84243 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.77□□□□□ -0.05
H3F3AP84243 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
H3F3AP84243 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3AP84243 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms