Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.34■□□□□ 0.21
CDKN2DP55273 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.34■□□□□ 0.21
CDKN2DP55273 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKN2DP55273 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.34■□□□□ 0.21
CDKN2DP55273 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.34■□□□□ 0.21
CDKN2DP55273 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKN2DP55273 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKN2DP55273 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.34■□□□□ 0.21
CDKN2DP55273 AC005622.1-201ENST00000636801 1703 ntBASIC16.33■□□□□ 0.21
CDKN2DP55273 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CDKN2DP55273 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKN2DP55273 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKN2DP55273 PAUPAR-201ENST00000630360 2965 ntBASIC16.33■□□□□ 0.21
CDKN2DP55273 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDKN2DP55273 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 PMS2P4-201ENST00000412466 1052 ntBASIC16.33■□□□□ 0.2
CDKN2DP55273 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 AC079776.4-201ENST00000511039 504 ntBASIC16.33■□□□□ 0.2
CDKN2DP55273 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 AC034105.1-201ENST00000563488 319 ntBASIC16.33■□□□□ 0.2
CDKN2DP55273 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDKN2DP55273 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 AC104109.2-201ENST00000602919 1418 ntBASIC16.33■□□□□ 0.2
CDKN2DP55273 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.33■□□□□ 0.2
CDKN2DP55273 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.33■□□□□ 0.2
CDKN2DP55273 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CDKN2DP55273 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKN2DP55273 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKN2DP55273 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDKN2DP55273 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKN2DP55273 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKN2DP55273 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKN2DP55273 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.32■□□□□ 0.2
CDKN2DP55273 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDKN2DP55273 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 MIR3909-201ENST00000579518 119 ntBASIC16.32■□□□□ 0.2
CDKN2DP55273 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKN2DP55273 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDKN2DP55273 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2DP55273 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CDKN2DP55273 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2DP55273 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2DP55273 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2DP55273 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2DP55273 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDKN2DP55273 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2DP55273 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2DP55273 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.31■□□□□ 0.2
CDKN2DP55273 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CDKN2DP55273 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2DP55273 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKN2DP55273 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms