Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.13■□□□□ 0.49
ATN1P54259 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.13■□□□□ 0.49
ATN1P54259 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
ATN1P54259 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.13■□□□□ 0.49
ATN1P54259 ZNF736P11Y-201ENST00000442535 1213 ntBASIC18.13■□□□□ 0.49
ATN1P54259 ZNF736P12Y-201ENST00000443152 1243 ntBASIC18.13■□□□□ 0.49
ATN1P54259 ZNF736P4Y-201ENST00000454995 1243 ntBASIC18.13■□□□□ 0.49
ATN1P54259 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC18.13■□□□□ 0.49
ATN1P54259 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.13■□□□□ 0.49
ATN1P54259 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.13■□□□□ 0.49
ATN1P54259 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.13■□□□□ 0.49
ATN1P54259 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.13■□□□□ 0.49
ATN1P54259 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.13■□□□□ 0.49
ATN1P54259 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ATN1P54259 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.13■□□□□ 0.49
ATN1P54259 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.13■□□□□ 0.49
ATN1P54259 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.13■□□□□ 0.49
ATN1P54259 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ATN1P54259 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ATN1P54259 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ATN1P54259 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.13■□□□□ 0.49
ATN1P54259 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATN1P54259 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.12■□□□□ 0.49
ATN1P54259 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.12■□□□□ 0.49
ATN1P54259 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ATN1P54259 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.12■□□□□ 0.49
ATN1P54259 BOLA2P3-201ENST00000404566 256 ntBASIC18.12■□□□□ 0.49
ATN1P54259 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.12■□□□□ 0.49
ATN1P54259 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.12■□□□□ 0.49
ATN1P54259 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.12■□□□□ 0.49
ATN1P54259 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.12■□□□□ 0.49
ATN1P54259 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.12■□□□□ 0.49
ATN1P54259 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.12■□□□□ 0.49
ATN1P54259 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.12■□□□□ 0.49
ATN1P54259 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.12■□□□□ 0.49
ATN1P54259 AC015936.2-201ENST00000593177 259 ntBASIC18.12■□□□□ 0.49
ATN1P54259 AC010319.3-201ENST00000597028 470 ntBASIC18.12■□□□□ 0.49
ATN1P54259 MIR8072-201ENST00000614241 80 ntBASIC18.12■□□□□ 0.49
ATN1P54259 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ATN1P54259 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 CLK3P2-201ENST00000427566 1453 ntBASIC18.12■□□□□ 0.49
ATN1P54259 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
ATN1P54259 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATN1P54259 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ATN1P54259 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATN1P54259 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ATN1P54259 MIR1908-201ENST00000410394 80 ntBASIC18.11■□□□□ 0.49
ATN1P54259 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ATN1P54259 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATN1P54259 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.11■□□□□ 0.49
ATN1P54259 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC18.11■□□□□ 0.49
ATN1P54259 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC18.11■□□□□ 0.49
ATN1P54259 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.11■□□□□ 0.49
ATN1P54259 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ATN1P54259 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.11■□□□□ 0.49
ATN1P54259 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.11■□□□□ 0.49
ATN1P54259 RN7SL121P-201ENST00000584223 273 ntBASIC18.11■□□□□ 0.49
ATN1P54259 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
ATN1P54259 BTNL10-201ENST00000595971 695 ntBASIC18.11■□□□□ 0.49
ATN1P54259 AC068313.1-201ENST00000604028 1008 ntBASIC18.11■□□□□ 0.49
ATN1P54259 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.11■□□□□ 0.49
ATN1P54259 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.11■□□□□ 0.49
ATN1P54259 MIR6869-201ENST00000619434 62 ntBASIC18.11■□□□□ 0.49
ATN1P54259 MIR6069-201ENST00000620069 79 ntBASIC18.11■□□□□ 0.49
ATN1P54259 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.11■□□□□ 0.49
ATN1P54259 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 AC016396.2-201ENST00000562575 1417 ntBASIC18.11■□□□□ 0.49
ATN1P54259 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.11■□□□□ 0.49
ATN1P54259 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.11■□□□□ 0.49
ATN1P54259 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.11■□□□□ 0.49
ATN1P54259 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATN1P54259 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms