Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
LIMK2P53671 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LIMK2P53671 PTCHD3P3-201ENST00000403073 906 ntBASIC16.7■□□□□ 0.26
LIMK2P53671 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.7■□□□□ 0.26
LIMK2P53671 RPS8P6-201ENST00000426177 609 ntBASIC16.7■□□□□ 0.26
LIMK2P53671 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.7■□□□□ 0.26
LIMK2P53671 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.7■□□□□ 0.26
LIMK2P53671 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.7■□□□□ 0.26
LIMK2P53671 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.7■□□□□ 0.26
LIMK2P53671 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LIMK2P53671 AC134684.3-201ENST00000641758 218 ntBASIC16.7■□□□□ 0.26
LIMK2P53671 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 AL139384.1-201ENST00000612143 3047 ntBASIC16.7■□□□□ 0.26
LIMK2P53671 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.7■□□□□ 0.26
LIMK2P53671 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
LIMK2P53671 AC131009.4-201ENST00000624048 1740 ntBASIC16.7■□□□□ 0.26
LIMK2P53671 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LIMK2P53671 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LIMK2P53671 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LIMK2P53671 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.69■□□□□ 0.26
LIMK2P53671 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LIMK2P53671 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.69■□□□□ 0.26
LIMK2P53671 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.69■□□□□ 0.26
LIMK2P53671 SLC25A6P2-201ENST00000497974 877 ntBASIC16.69■□□□□ 0.26
LIMK2P53671 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LIMK2P53671 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.69■□□□□ 0.26
LIMK2P53671 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
LIMK2P53671 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.69■□□□□ 0.26
LIMK2P53671 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 GGTLC5P-201ENST00000617623 998 ntBASIC16.69■□□□□ 0.26
LIMK2P53671 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LIMK2P53671 PI4KAP1-204ENST00000612579 1703 ntBASIC16.69■□□□□ 0.26
LIMK2P53671 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 AL596087.1-201ENST00000400979 1969 ntBASIC16.69■□□□□ 0.26
LIMK2P53671 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 AC008894.3-201ENST00000624324 3103 ntBASIC16.69■□□□□ 0.26
LIMK2P53671 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIMK2P53671 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.69■□□□□ 0.26
LIMK2P53671 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LIMK2P53671 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LIMK2P53671 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LIMK2P53671 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.68■□□□□ 0.26
LIMK2P53671 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 MRPL20P1-201ENST00000400819 433 ntBASIC16.68■□□□□ 0.26
LIMK2P53671 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.68■□□□□ 0.26
LIMK2P53671 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.68■□□□□ 0.26
LIMK2P53671 AC010654.1-201ENST00000615722 808 ntBASIC16.68■□□□□ 0.26
LIMK2P53671 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.68■□□□□ 0.26
LIMK2P53671 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.68■□□□□ 0.26
LIMK2P53671 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
LIMK2P53671 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LIMK2P53671 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIMK2P53671 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.68■□□□□ 0.26
LIMK2P53671 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.68■□□□□ 0.26
LIMK2P53671 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LIMK2P53671 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms