Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.56■□□□□ 0.08
SMSP52788 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SMSP52788 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SMSP52788 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SMSP52788 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.56■□□□□ 0.08
SMSP52788 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SMSP52788 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SMSP52788 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SMSP52788 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.56■□□□□ 0.08
SMSP52788 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 ELK2BP-201ENST00000415014 1224 ntBASIC15.56■□□□□ 0.08
SMSP52788 AC108073.2-201ENST00000464002 357 ntBASIC15.56■□□□□ 0.08
SMSP52788 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.56■□□□□ 0.08
SMSP52788 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.56■□□□□ 0.08
SMSP52788 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 STK19B-204ENST00000512515 211 ntBASIC15.56■□□□□ 0.08
SMSP52788 RFPL4AP1-201ENST00000530883 850 ntBASIC15.56■□□□□ 0.08
SMSP52788 AP002472.1-201ENST00000577490 586 ntBASIC15.56■□□□□ 0.08
SMSP52788 AC008667.4-201ENST00000607370 168 ntBASIC15.56■□□□□ 0.08
SMSP52788 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.56■□□□□ 0.08
SMSP52788 AL513190.1-201ENST00000621254 727 ntBASIC15.56■□□□□ 0.08
SMSP52788 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.56■□□□□ 0.08
SMSP52788 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.56■□□□□ 0.08
SMSP52788 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.56■□□□□ 0.08
SMSP52788 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.56■□□□□ 0.08
SMSP52788 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.56■□□□□ 0.08
SMSP52788 HLA-A-202ENST00000376806 1854 ntBASIC15.56■□□□□ 0.08
SMSP52788 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.56■□□□□ 0.08
SMSP52788 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SMSP52788 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.56■□□□□ 0.08
SMSP52788 PCDHA1-201ENST00000378133 2726 ntBASIC15.56■□□□□ 0.08
SMSP52788 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 AL662844.4-201ENST00000606367 2838 ntBASIC15.56■□□□□ 0.08
SMSP52788 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
SMSP52788 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMSP52788 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.55■□□□□ 0.08
SMSP52788 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.55■□□□□ 0.08
SMSP52788 AC006504.4-201ENST00000592118 1568 ntBASIC15.55■□□□□ 0.08
SMSP52788 AC009336.1-201ENST00000608941 1553 ntBASIC15.55■□□□□ 0.08
SMSP52788 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 AC003669.1-201ENST00000334569 611 ntBASIC15.55■□□□□ 0.08
SMSP52788 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
SMSP52788 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 KLF4P1-201ENST00000412782 1185 ntBASIC15.55■□□□□ 0.08
SMSP52788 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.55■□□□□ 0.08
SMSP52788 CEND1P1-201ENST00000451006 455 ntBASIC15.55■□□□□ 0.08
SMSP52788 ALG1L5P-201ENST00000482043 771 ntBASIC15.55■□□□□ 0.08
SMSP52788 RPS15P9-201ENST00000494093 319 ntBASIC15.55■□□□□ 0.08
SMSP52788 IGHV3-65-201ENST00000523210 341 ntBASIC15.55■□□□□ 0.08
SMSP52788 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SMSP52788 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.55■□□□□ 0.08
SMSP52788 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SMSP52788 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.55■□□□□ 0.08
SMSP52788 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMSP52788 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.54■□□□□ 0.08
SMSP52788 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms