Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GTF2A1P52655 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.29■□□□□ 0.2
GTF2A1P52655 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.29■□□□□ 0.2
GTF2A1P52655 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GTF2A1P52655 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 AC067750.1-201ENST00000608826 6545 ntBASIC16.29■□□□□ 0.2
GTF2A1P52655 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GTF2A1P52655 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GTF2A1P52655 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.29■□□□□ 0.2
GTF2A1P52655 AC091390.4-202ENST00000476426 537 ntBASIC16.29■□□□□ 0.2
GTF2A1P52655 AL109923.1-201ENST00000618799 583 ntBASIC16.29■□□□□ 0.2
GTF2A1P52655 AC131212.4-201ENST00000623606 975 ntBASIC16.29■□□□□ 0.2
GTF2A1P52655 AL023875.1-201ENST00000640777 796 ntBASIC16.29■□□□□ 0.2
GTF2A1P52655 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
GTF2A1P52655 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.29■□□□□ 0.2
GTF2A1P52655 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC16.29■□□□□ 0.2
GTF2A1P52655 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GTF2A1P52655 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 MBLAC2-202ENST00000514906 1936 ntBASIC16.29■□□□□ 0.2
GTF2A1P52655 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GTF2A1P52655 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC16.29■□□□□ 0.2
GTF2A1P52655 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GTF2A1P52655 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.29■□□□□ 0.2
GTF2A1P52655 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GTF2A1P52655 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.28■□□□□ 0.2
GTF2A1P52655 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.28■□□□□ 0.2
GTF2A1P52655 KRT16P5-201ENST00000455284 522 ntBASIC16.28■□□□□ 0.2
GTF2A1P52655 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.28■□□□□ 0.2
GTF2A1P52655 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.28■□□□□ 0.2
GTF2A1P52655 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.28■□□□□ 0.2
GTF2A1P52655 AC069544.1-201ENST00000609399 999 ntBASIC16.28■□□□□ 0.2
GTF2A1P52655 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.28■□□□□ 0.2
GTF2A1P52655 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GTF2A1P52655 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GTF2A1P52655 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.28■□□□□ 0.2
GTF2A1P52655 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC16.28■□□□□ 0.2
GTF2A1P52655 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.28■□□□□ 0.2
GTF2A1P52655 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GTF2A1P52655 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GTF2A1P52655 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GTF2A1P52655 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.28■□□□□ 0.2
GTF2A1P52655 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GTF2A1P52655 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GTF2A1P52655 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.27■□□□□ 0.2
GTF2A1P52655 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.27■□□□□ 0.2
GTF2A1P52655 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GTF2A1P52655 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
GTF2A1P52655 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.27■□□□□ 0.2
GTF2A1P52655 KRASP1-201ENST00000407852 552 ntBASIC16.27■□□□□ 0.2
GTF2A1P52655 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GTF2A1P52655 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GTF2A1P52655 KRT18P41-201ENST00000518924 1277 ntBASIC16.27■□□□□ 0.2
GTF2A1P52655 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.27■□□□□ 0.2
GTF2A1P52655 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.27■□□□□ 0.2
GTF2A1P52655 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms