Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IDH3AP50213 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IDH3AP50213 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
IDH3AP50213 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IDH3AP50213 LINC02228-204ENST00000642115 2962 ntBASIC16.11■□□□□ 0.17
IDH3AP50213 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.11■□□□□ 0.17
IDH3AP50213 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.11■□□□□ 0.17
IDH3AP50213 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.11■□□□□ 0.17
IDH3AP50213 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.11■□□□□ 0.17
IDH3AP50213 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
IDH3AP50213 MIR648-201ENST00000385046 94 ntBASIC16.11■□□□□ 0.17
IDH3AP50213 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.11■□□□□ 0.17
IDH3AP50213 POM121L3P-201ENST00000419331 1163 ntBASIC16.11■□□□□ 0.17
IDH3AP50213 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 TOB2P1-201ENST00000469761 992 ntBASIC16.11■□□□□ 0.17
IDH3AP50213 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.11■□□□□ 0.17
IDH3AP50213 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.11■□□□□ 0.17
IDH3AP50213 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.11■□□□□ 0.17
IDH3AP50213 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.11■□□□□ 0.17
IDH3AP50213 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
IDH3AP50213 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IDH3AP50213 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
IDH3AP50213 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.1■□□□□ 0.17
IDH3AP50213 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
IDH3AP50213 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.1■□□□□ 0.17
IDH3AP50213 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
IDH3AP50213 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 AC091167.2-201ENST00000579581 588 ntBASIC16.1■□□□□ 0.17
IDH3AP50213 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.1■□□□□ 0.17
IDH3AP50213 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.1■□□□□ 0.17
IDH3AP50213 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.1■□□□□ 0.17
IDH3AP50213 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
IDH3AP50213 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.1■□□□□ 0.17
IDH3AP50213 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
IDH3AP50213 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 NCF1C-201ENST00000438382 1427 ntBASIC16.1■□□□□ 0.17
IDH3AP50213 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IDH3AP50213 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.09■□□□□ 0.17
IDH3AP50213 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.09■□□□□ 0.17
IDH3AP50213 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.09■□□□□ 0.17
IDH3AP50213 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.09■□□□□ 0.17
IDH3AP50213 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
IDH3AP50213 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 SLC22A20-204ENST00000530038 1673 ntBASIC16.09■□□□□ 0.17
IDH3AP50213 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.09■□□□□ 0.17
IDH3AP50213 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.09■□□□□ 0.17
IDH3AP50213 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3AP50213 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms