Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC9A3P48764 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC9A3P48764 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC9A3P48764 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.24■□□□□ 0.03
SLC9A3P48764 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC9A3P48764 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC9A3P48764 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC9A3P48764 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC9A3P48764 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC9A3P48764 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC9A3P48764 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SLC9A3P48764 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC9A3P48764 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC9A3P48764 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 SCARNA2-201ENST00000458748 420 ntBASIC15.24■□□□□ 0.03
SLC9A3P48764 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC9A3P48764 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC9A3P48764 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC9A3P48764 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC9A3P48764 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC9A3P48764 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC9A3P48764 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC9A3P48764 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SLC9A3P48764 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC9A3P48764 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC9A3P48764 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC9A3P48764 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC9A3P48764 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC9A3P48764 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC9A3P48764 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC9A3P48764 KRT18P31-201ENST00000506277 1292 ntBASIC15.23■□□□□ 0.03
SLC9A3P48764 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC9A3P48764 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 AC004706.3-202ENST00000621574 984 ntBASIC15.23■□□□□ 0.03
SLC9A3P48764 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.23■□□□□ 0.03
SLC9A3P48764 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC9A3P48764 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 ME2P1-201ENST00000426028 1970 ntBASIC15.23■□□□□ 0.03
SLC9A3P48764 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC9A3P48764 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC9A3P48764 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC9A3P48764 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 FLJ16779-201ENST00000612722 7638 ntBASIC15.22■□□□□ 0.03
SLC9A3P48764 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms