Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 PMS2P4-201ENST00000412466 1052 ntBASIC14.74□□□□□ -0.05
CSNK1A1P48729 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 KRT18P2-201ENST00000447938 1258 ntBASIC14.74□□□□□ -0.05
CSNK1A1P48729 KRT18P3-201ENST00000451602 1288 ntBASIC14.74□□□□□ -0.05
CSNK1A1P48729 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 KRT19P2-202ENST00000557173 1012 ntBASIC14.74□□□□□ -0.05
CSNK1A1P48729 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 AC020765.3-201ENST00000613051 740 ntBASIC14.74□□□□□ -0.05
CSNK1A1P48729 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 FAM197Y3-203ENST00000618346 717 ntBASIC14.74□□□□□ -0.05
CSNK1A1P48729 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.74□□□□□ -0.05
CSNK1A1P48729 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.73□□□□□ -0.05
CSNK1A1P48729 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 PCGF3-213ENST00000620529 1899 ntBASIC14.73□□□□□ -0.05
CSNK1A1P48729 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 ME2P1-201ENST00000426028 1970 ntBASIC14.73□□□□□ -0.05
CSNK1A1P48729 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1A1P48729 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1A1P48729 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms