Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.52■□□□□ 0.4
BRCC3P46736 AC105021.1-202ENST00000570572 669 ntBASIC17.52■□□□□ 0.4
BRCC3P46736 RN7SL828P-201ENST00000607615 303 ntBASIC17.52■□□□□ 0.4
BRCC3P46736 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.52■□□□□ 0.4
BRCC3P46736 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRCC3P46736 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
BRCC3P46736 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.52■□□□□ 0.39
BRCC3P46736 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRCC3P46736 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRCC3P46736 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.52■□□□□ 0.39
BRCC3P46736 AL589702.1-201ENST00000641229 1509 ntBASIC17.52■□□□□ 0.39
BRCC3P46736 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRCC3P46736 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRCC3P46736 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
BRCC3P46736 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.51■□□□□ 0.39
BRCC3P46736 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.51■□□□□ 0.39
BRCC3P46736 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.51■□□□□ 0.39
BRCC3P46736 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 AC022211.2-201ENST00000585075 2527 ntBASIC17.51■□□□□ 0.39
BRCC3P46736 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BRCC3P46736 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BRCC3P46736 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BRCC3P46736 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.51■□□□□ 0.39
BRCC3P46736 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BRCC3P46736 HLA-A-202ENST00000376806 1854 ntBASIC17.51■□□□□ 0.39
BRCC3P46736 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 MRPS18AP1-201ENST00000414458 589 ntBASIC17.51■□□□□ 0.39
BRCC3P46736 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 COX20P2-201ENST00000452636 358 ntBASIC17.51■□□□□ 0.39
BRCC3P46736 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.51■□□□□ 0.39
BRCC3P46736 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.51■□□□□ 0.39
BRCC3P46736 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.51■□□□□ 0.39
BRCC3P46736 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.51■□□□□ 0.39
BRCC3P46736 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.51■□□□□ 0.39
BRCC3P46736 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
BRCC3P46736 PCGF3-213ENST00000620529 1899 ntBASIC17.51■□□□□ 0.39
BRCC3P46736 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
BRCC3P46736 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BRCC3P46736 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.51■□□□□ 0.39
BRCC3P46736 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCC3P46736 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BRCC3P46736 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BRCC3P46736 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
BRCC3P46736 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BRCC3P46736 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
BRCC3P46736 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.5■□□□□ 0.39
BRCC3P46736 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BRCC3P46736 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.5■□□□□ 0.39
BRCC3P46736 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.5■□□□□ 0.39
BRCC3P46736 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.5■□□□□ 0.39
BRCC3P46736 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.5■□□□□ 0.39
BRCC3P46736 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.5■□□□□ 0.39
BRCC3P46736 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.5■□□□□ 0.39
BRCC3P46736 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.5■□□□□ 0.39
BRCC3P46736 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCC3P46736 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCC3P46736 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCC3P46736 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCC3P46736 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
BRCC3P46736 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCC3P46736 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.49■□□□□ 0.39
BRCC3P46736 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCC3P46736 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCC3P46736 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms