Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
NCAPD3P42695 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC28.55■■■□□ 2.16
NCAPD3P42695 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NCAPD3P42695 RPS2P36-201ENST00000456516 831 ntBASIC28.55■■■□□ 2.16
NCAPD3P42695 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC28.55■■■□□ 2.16
NCAPD3P42695 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC28.55■■■□□ 2.16
NCAPD3P42695 AHRR-211ENST00000515206 462 ntTSL 5 BASIC28.55■■■□□ 2.16
NCAPD3P42695 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC28.55■■■□□ 2.16
NCAPD3P42695 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
NCAPD3P42695 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
NCAPD3P42695 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC28.55■■■□□ 2.16
NCAPD3P42695 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
NCAPD3P42695 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC28.55■■■□□ 2.16
NCAPD3P42695 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC28.55■■■□□ 2.16
NCAPD3P42695 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
NCAPD3P42695 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC28.55■■■□□ 2.16
NCAPD3P42695 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
NCAPD3P42695 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
NCAPD3P42695 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
NCAPD3P42695 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
NCAPD3P42695 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 AC004987.2-201ENST00000395959 1148 ntBASIC28.54■■■□□ 2.16
NCAPD3P42695 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC28.54■■■□□ 2.16
NCAPD3P42695 TSACC-208ENST00000481479 741 ntTSL 2 BASIC28.54■■■□□ 2.16
NCAPD3P42695 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
NCAPD3P42695 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 AC018735.1-201ENST00000437208 1502 ntBASIC28.54■■■□□ 2.16
NCAPD3P42695 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NCAPD3P42695 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC28.54■■■□□ 2.16
NCAPD3P42695 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
NCAPD3P42695 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC28.53■■■□□ 2.16
NCAPD3P42695 RPSAP36-202ENST00000494591 1261 ntBASIC28.53■■■□□ 2.16
NCAPD3P42695 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 SPCS2P2-201ENST00000603270 608 ntBASIC28.53■■■□□ 2.16
NCAPD3P42695 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC28.53■■■□□ 2.16
NCAPD3P42695 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC28.53■■■□□ 2.16
NCAPD3P42695 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC28.53■■■□□ 2.16
NCAPD3P42695 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 AC104581.1-202ENST00000635932 2618 ntBASIC28.53■■■□□ 2.16
NCAPD3P42695 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC28.53■■■□□ 2.16
NCAPD3P42695 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC28.53■■■□□ 2.16
NCAPD3P42695 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 COMP-202ENST00000425807 2292 ntTSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
NCAPD3P42695 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC28.53■■■□□ 2.16
NCAPD3P42695 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC28.53■■■□□ 2.16
NCAPD3P42695 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC28.53■■■□□ 2.16
NCAPD3P42695 TMEM198B-204ENST00000484016 896 ntBASIC28.53■■■□□ 2.16
NCAPD3P42695 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC28.53■■■□□ 2.16
NCAPD3P42695 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC28.53■■■□□ 2.16
NCAPD3P42695 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC28.53■■■□□ 2.16
NCAPD3P42695 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
NCAPD3P42695 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 AC098818.2-201ENST00000564925 2320 ntBASIC28.52■■■□□ 2.16
NCAPD3P42695 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC28.52■■■□□ 2.16
NCAPD3P42695 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC28.52■■■□□ 2.16
NCAPD3P42695 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC28.52■■■□□ 2.16
NCAPD3P42695 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
NCAPD3P42695 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 ACKR1-201ENST00000368121 1240 ntBASIC28.52■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms