Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFSF9P41273 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFSF9P41273 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFSF9P41273 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFSF9P41273 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF9P41273 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TNFSF9P41273 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TNFSF9P41273 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF9P41273 AL662844.4-201ENST00000606367 2838 ntBASIC17.84■□□□□ 0.45
TNFSF9P41273 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFSF9P41273 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF9P41273 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TNFSF9P41273 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF9P41273 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TNFSF9P41273 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFSF9P41273 AP3S2-216ENST00000617003 1561 ntBASIC17.83■□□□□ 0.45
TNFSF9P41273 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.83■□□□□ 0.45
TNFSF9P41273 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFSF9P41273 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFSF9P41273 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFSF9P41273 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TNFSF9P41273 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.83■□□□□ 0.45
TNFSF9P41273 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.83■□□□□ 0.44
TNFSF9P41273 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF9P41273 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TNFSF9P41273 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TNFSF9P41273 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFSF9P41273 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.83■□□□□ 0.44
TNFSF9P41273 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFSF9P41273 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFSF9P41273 AC027796.2-201ENST00000575326 344 ntBASIC17.83■□□□□ 0.44
TNFSF9P41273 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.83■□□□□ 0.44
TNFSF9P41273 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.83■□□□□ 0.44
TNFSF9P41273 SPTSSB-204ENST00000617024 1292 ntBASIC17.83■□□□□ 0.44
TNFSF9P41273 Z92544.3-201ENST00000624747 417 ntBASIC17.83■□□□□ 0.44
TNFSF9P41273 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFSF9P41273 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF9P41273 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF9P41273 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.83■□□□□ 0.44
TNFSF9P41273 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF9P41273 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFSF9P41273 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFSF9P41273 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 ME2P1-201ENST00000426028 1970 ntBASIC17.82■□□□□ 0.44
TNFSF9P41273 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF9P41273 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF9P41273 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
TNFSF9P41273 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.82■□□□□ 0.44
TNFSF9P41273 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF9P41273 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.82■□□□□ 0.44
TNFSF9P41273 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF9P41273 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.82■□□□□ 0.44
TNFSF9P41273 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.82■□□□□ 0.44
TNFSF9P41273 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF9P41273 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF9P41273 AP001059.3-201ENST00000619053 235 ntBASIC17.82■□□□□ 0.44
TNFSF9P41273 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 AC099398.1-201ENST00000567919 2776 ntBASIC17.82■□□□□ 0.44
TNFSF9P41273 AC008677.1-201ENST00000519230 1561 ntBASIC17.82■□□□□ 0.44
TNFSF9P41273 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 AC084018.2-201ENST00000613093 2607 ntBASIC17.82■□□□□ 0.44
TNFSF9P41273 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFSF9P41273 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF9P41273 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFSF9P41273 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 AC092364.2-201ENST00000596710 2692 ntBASIC17.81■□□□□ 0.44
TNFSF9P41273 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFSF9P41273 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.81■□□□□ 0.44
TNFSF9P41273 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms