Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SNCAP37840 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 KLF4P1-201ENST00000412782 1185 ntBASIC13.69□□□□□ -0.22
SNCAP37840 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SNCAP37840 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.69□□□□□ -0.22
SNCAP37840 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.69□□□□□ -0.22
SNCAP37840 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.69□□□□□ -0.22
SNCAP37840 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.69□□□□□ -0.22
SNCAP37840 AC005336.2-201ENST00000593183 939 ntBASIC13.69□□□□□ -0.22
SNCAP37840 AC013268.4-201ENST00000637413 2228 ntBASIC13.69□□□□□ -0.22
SNCAP37840 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SNCAP37840 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.69□□□□□ -0.22
SNCAP37840 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.69□□□□□ -0.22
SNCAP37840 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SNCAP37840 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.69□□□□□ -0.22
SNCAP37840 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 AC097376.2-205ENST00000610159 5334 ntBASIC13.69□□□□□ -0.22
SNCAP37840 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.69□□□□□ -0.22
SNCAP37840 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SNCAP37840 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.68□□□□□ -0.22
SNCAP37840 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.68□□□□□ -0.22
SNCAP37840 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.68□□□□□ -0.22
SNCAP37840 BX276092.5-203ENST00000456199 560 ntBASIC13.68□□□□□ -0.22
SNCAP37840 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.68□□□□□ -0.22
SNCAP37840 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.68□□□□□ -0.22
SNCAP37840 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.68□□□□□ -0.22
SNCAP37840 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SNCAP37840 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.68□□□□□ -0.22
SNCAP37840 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.68□□□□□ -0.22
SNCAP37840 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNCAP37840 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms