Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.78■□□□□ 0.28
RPA3P35244 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.78■□□□□ 0.28
RPA3P35244 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RPA3P35244 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RPA3P35244 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPA3P35244 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RPA3P35244 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 AC006449.6-201ENST00000612330 2296 ntBASIC16.77■□□□□ 0.28
RPA3P35244 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.77■□□□□ 0.28
RPA3P35244 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.77■□□□□ 0.28
RPA3P35244 AC097637.2-201ENST00000624096 1997 ntBASIC16.77■□□□□ 0.28
RPA3P35244 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RPA3P35244 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.77■□□□□ 0.28
RPA3P35244 PRYP5-201ENST00000451909 266 ntBASIC16.77■□□□□ 0.28
RPA3P35244 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.77■□□□□ 0.28
RPA3P35244 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.77■□□□□ 0.28
RPA3P35244 AC073648.2-201ENST00000510116 352 ntBASIC16.77■□□□□ 0.28
RPA3P35244 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RPA3P35244 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPA3P35244 MTDHP4-201ENST00000600287 670 ntBASIC16.77■□□□□ 0.28
RPA3P35244 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.77■□□□□ 0.28
RPA3P35244 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.77■□□□□ 0.28
RPA3P35244 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.77■□□□□ 0.28
RPA3P35244 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.77■□□□□ 0.28
RPA3P35244 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPA3P35244 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.77■□□□□ 0.27
RPA3P35244 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPA3P35244 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPA3P35244 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPA3P35244 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPA3P35244 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.77■□□□□ 0.27
RPA3P35244 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.77■□□□□ 0.27
RPA3P35244 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.77■□□□□ 0.27
RPA3P35244 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
RPA3P35244 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPA3P35244 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RPA3P35244 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPA3P35244 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.77■□□□□ 0.27
RPA3P35244 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RPA3P35244 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.76■□□□□ 0.27
RPA3P35244 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.76■□□□□ 0.27
RPA3P35244 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RPA3P35244 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.76■□□□□ 0.27
RPA3P35244 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.76■□□□□ 0.27
RPA3P35244 AC079781.3-201ENST00000449110 356 ntBASIC16.76■□□□□ 0.27
RPA3P35244 FAM197Y8-203ENST00000450145 560 ntBASIC16.76■□□□□ 0.27
RPA3P35244 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.76■□□□□ 0.27
RPA3P35244 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.76■□□□□ 0.27
RPA3P35244 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.76■□□□□ 0.27
RPA3P35244 AL031008.1-201ENST00000619963 541 ntBASIC16.76■□□□□ 0.27
RPA3P35244 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RPA3P35244 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.76■□□□□ 0.27
RPA3P35244 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.76■□□□□ 0.27
RPA3P35244 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.76■□□□□ 0.27
RPA3P35244 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RPA3P35244 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.76■□□□□ 0.27
RPA3P35244 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPA3P35244 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.75■□□□□ 0.27
RPA3P35244 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPA3P35244 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms