Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.65■□□□□ 0.26
LSP1P33241 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.65■□□□□ 0.26
LSP1P33241 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LSP1P33241 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LSP1P33241 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LSP1P33241 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.65■□□□□ 0.26
LSP1P33241 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LSP1P33241 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LSP1P33241 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LSP1P33241 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LSP1P33241 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.65■□□□□ 0.26
LSP1P33241 C2orf69P3-201ENST00000565542 1120 ntBASIC16.65■□□□□ 0.26
LSP1P33241 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSP1P33241 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LSP1P33241 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.65■□□□□ 0.26
LSP1P33241 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LSP1P33241 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.26
LSP1P33241 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LSP1P33241 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
LSP1P33241 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LSP1P33241 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LSP1P33241 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.64■□□□□ 0.25
LSP1P33241 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
LSP1P33241 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LSP1P33241 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LSP1P33241 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 TSPY14P-201ENST00000303979 915 ntBASIC16.64■□□□□ 0.25
LSP1P33241 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 MIR648-201ENST00000385046 94 ntBASIC16.64■□□□□ 0.25
LSP1P33241 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LSP1P33241 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.64■□□□□ 0.25
LSP1P33241 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.64■□□□□ 0.25
LSP1P33241 RBM17P1-201ENST00000453646 1190 ntBASIC16.64■□□□□ 0.25
LSP1P33241 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.64■□□□□ 0.25
LSP1P33241 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.64■□□□□ 0.25
LSP1P33241 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.64■□□□□ 0.25
LSP1P33241 AL512604.3-201ENST00000569583 964 ntBASIC16.64■□□□□ 0.25
LSP1P33241 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.64■□□□□ 0.25
LSP1P33241 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LSP1P33241 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.64■□□□□ 0.25
LSP1P33241 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSP1P33241 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
LSP1P33241 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.63■□□□□ 0.25
LSP1P33241 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.63■□□□□ 0.25
LSP1P33241 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 AP002414.1-201ENST00000391405 1147 ntBASIC16.63■□□□□ 0.25
LSP1P33241 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms